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Olga Tanaseichuk

Software Engineer

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Biography

Interests

  • Artificial Intelligence
  • ML Infrustructure
  • Bioinformatics

Education

  • PhD in Computer Science, 2013

    University of California, Riverside

  • MS in Applied Mathematics, 2009

    Taras Shevchenko National University of Kyiv

Recent Publications

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Mapping the malaria parasite druggable genome by using in vitro evolution and chemogenomics.

Chemogenetic characterization through in vitro evolution combined with whole-genome analysis can identify antimalarial drug targets and …
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A broad analysis of resistance development in the malaria parasite

It is unclear whether new antimalarial compounds may rapidly lose effectiveness in the field because of parasite resistance. Here, …
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High-Throughput Assay and Discovery of Small Molecules that Interrupt Malaria Transmission

Preventing transmission is an important element of malaria control. However, most of the current available methods to assay for malaria …
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Phylogeny-based classification of microbial communities

Motivation: Next-generation sequencing coupled with metagenomics has led to the rapid growth of sequence databases and enabled a new …
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Separating metagenomic short reads into genomes via clustering

The metagenomics approach allows the simultaneous sequencing of all genomes in an environmental sample. This results in high complexity …
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Popular Topics

Abundance Level Abundance Ratio abundance-based binning Algorithms Bioinformatics Cellular and Medical Topics Computational Biology/Bioinformatics expectation maximization Malaria metagenomics next-generation sequencing Normalize Error Rate Parasite biology Pharmacology Phylogenetic Distance Physiological Sequencing Error

Contact

  • 901 Cherry Ave, San Bruno, CA 94066
  • email to book an appointment